STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1847KEGG: cps:CPS_2617 hypothetical protein. (207 aa)    
Predicted Functional Partners:
Ping_1848
KEGG: cps:CPS_2618 hypothetical protein.
 
     0.958
Ping_1846
PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein.
 
     0.946
Ping_2846
PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cps:CPS_4327 TPR domain protein.
  
     0.611
Ping_1887
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4666 transcriptional regulator, LysR family.
  
     0.594
pfaC
Polyunsaturated fatty acid synthase PfaC; PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: cps:CPS_3102 polyunsaturated fatty acid synthase PfaC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.529
Ping_1685
KEGG: cps:CPS_3103 polyunsaturated fatty acid synthase PfaB.
  
     0.521
Ping_1098
KEGG: cps:CPS_3322 hypothetical protein.
  
     0.518
Ping_2845
PFAM: outer membrane efflux protein; KEGG: cps:CPS_4326 outer membrane efflux protein.
  
     0.496
Ping_1020
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein.
  
     0.490
Ping_1845
PFAM: protein of unknown function DUF1415; KEGG: ilo:IL2495 hypothetical protein.
 
     0.485
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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