STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1872KEGG: ppr:PBPRA2755 putative tricarboxylic transport TctB. (159 aa)    
Predicted Functional Partners:
Ping_1871
PFAM: protein of unknown function DUF112, transmembrane; KEGG: vpa:VP1653 putative tricarboxylic transport TctA.
 
  
 0.989
Ping_1873
PFAM: Uncharacterized protein UPF0065; KEGG: ppr:PBPRA2754 putative tricarboxylic transport TctC.
 
  
 0.977
Ping_1864
Response regulator receiver and unknown domain protein; PFAM: response regulator receiver; KEGG: vvy:VV1604 response regulator of citrate/malate metabolism.
 
     0.732
Ping_0368
PFAM: O-antigen polymerase; KEGG: ppr:PBPRA3291 hypothetical protein.
  
     0.691
Ping_3583
PFAM: flagellar hook-length control protein; KEGG: vpa:VPA1553 putative flagellar hook-length control protein FliK.
  
     0.499
Ping_3162
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: vpa:VPA0353 hypothetical protein.
  
     0.467
Ping_1694
KEGG: cps:CPS_0257 hypothetical protein.
  
     0.466
Ping_1870
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ppr:PBPRB0234 putative transcriptional regulator, GntR family.
       0.444
Ping_3160
PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO0706 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
  
     0.437
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.