STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1886KEGG: pha:PSHAa1013 hypothetical protein. (81 aa)    
Predicted Functional Partners:
modF
ABC transporter for molybdenum ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_1777 putative molybdenum ABC transporter, ATP-binding protein ModF.
  
     0.554
Ping_0686
PFAM: peptidase M50; KEGG: son:SO0823 hypothetical protein.
  
     0.530
Ping_1887
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4666 transcriptional regulator, LysR family.
       0.504
Ping_0833
KEGG: sdn:Sden_1544 hypothetical protein.
  
     0.493
Ping_2351
PFAM: protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: ppr:PBPRA2167 hypothetical protein.
  
     0.449
Ping_0999
KEGG: vfi:VFA0764 hypothetical transcriptional regulatory protein.
 
     0.422
Ping_1004
KEGG: vfi:VFA0759 hypothetical membrane protein.
 
     0.419
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.