STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1934KEGG: cps:CPS_3381 hypothetical protein. (110 aa)    
Predicted Functional Partners:
Ping_1935
KEGG: cps:CPS_2680 hypothetical protein.
       0.536
Ping_1933
PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_3143 GCN5-related N-acetyltransferase.
       0.518
Ping_0575
PFAM: putative methyltransferase; KEGG: pha:PSHAa2295 methyltransferase SAM dependent.
  
     0.497
Ping_0905
KEGG: cps:CPS_4187 putative ATP synthase F0, A subunit.
  
     0.433
Ping_0067
PFAM: MucB/RseB family protein; KEGG: cps:CPS_4127 sigma-E factor regulatory protein RseB.
  
     0.430
Ping_0429
TIGRFAM: histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sde:Sde_0750 sensory transduction histidine kinase.
  
     0.402
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.