STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1948KEGG: cps:CPS_0518 hypothetical protein. (215 aa)    
Predicted Functional Partners:
Ping_1949
KEGG: sfr:Sfri_0606 hypothetical protein.
       0.773
Ping_2108
PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: son:SO0771 hypothetical protein.
     0.771
Ping_2109
KEGG: cps:CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase family.
      0.645
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.535
Ping_1788
KEGG: vch:VCA0343 hypothetical protein.
 
     0.485
Ping_2352
KEGG: vch:VCA0343 hypothetical protein.
 
     0.484
Ping_1549
Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); PFAM: DNA photolyase, FAD-binding; KEGG: pat:Patl_0151 deoxyribodipyrimidine photolyase.
 
     0.418
Ping_0905
KEGG: cps:CPS_4187 putative ATP synthase F0, A subunit.
  
     0.406
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.