STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_1956Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: vvy:VV1092 ABC-type sugar transport system, periplasmic component; TC 3.A.1.1.-. (417 aa)    
Predicted Functional Partners:
Ping_1958
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06080 ABC-type sugar transport system, permease component; TC 3.A.1.1.-.
 
 0.994
Ping_1957
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_06081 ABC-type sugar transport system, permease components; TC 3.A.1.1.-.
 
  0.987
Ping_1959
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_06079 ABC-type sugar transport system, ATPase components; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
  0.963
Ping_2284
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: hch:HCH_06083 ABC-type sugar transport system, periplasmic component; TC 3.A.1.1.-.
  
  
 
0.906
Ping_2009
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2864 ABC transporter, permease protein, putative; TC 3.A.1.1.-.
 
   0.552
Ping_2285
PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRB1907 putative signal transduction histidine kinase.
 
     0.516
Ping_3171
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3632 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
  
 
 0.514
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 
 0.495
Ping_2510
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sal:Sala_0749 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
  
 
 0.495
Ping_2912
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein.
  
 
 0.495
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.