STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2009PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2864 ABC transporter, permease protein, putative; TC 3.A.1.1.-. (283 aa)    
Predicted Functional Partners:
Ping_2010
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2863 sugar ABC transporter, permease protein, putative; TC 3.A.1.1.-.
   0.977
Ping_2008
PFAM: extracellular solute-binding protein, family 1; KEGG: bpm:BURPS1710b_A1184 ABC transporter, substrate-binding protein; TC 3.A.1.1.-.
 
 
 0.922
Ping_2011
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: eca:ECA0851 putative sugar ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
   0.906
Ping_2509
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sal:Sala_0750 binding-protein-dependent transport systems inner membrane component; TC 3.A.1.1.-.
 
   0.882
Ping_2911
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03062 alpha-glucosides transport system permease ABC transporter protein.
 
   0.873
Ping_2094
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0239 SN-glycerol-3-phosphate ABC transporter, permease protein; TC 3.A.1.1.-.
   0.872
Ping_2913
Alpha-glucoside transport system ATP-binding protein; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc03065 alpha-glucosides transport ATP-binding ABC transporter protein.
 
   0.864
Ping_2512
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA0851 putative sugar ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
   0.858
ugpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
   0.856
Ping_1959
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_06079 ABC-type sugar transport system, ATPase components; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
 
   0.855
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.