STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2045PFAM: Ferritin, Dps family protein; KEGG: pat:Patl_3841 ferritin and Dps; Belongs to the Dps family. (156 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.920
Ping_2704
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sde:Sde_0733 putative serine protein kinase, PrkA.
   
    0.730
Ping_2314
PFAM: OsmC family protein; KEGG: ppr:PBPRB1177 putative organic hydroperoxide resistance protein.
  
  
 0.715
Ping_0487
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: dvu:DVU1638 hypothetical protein.
  
  
 0.680
Ping_0745
PFAM: BolA family protein; KEGG: vch:VC2296 bolA protein; Belongs to the BolA/IbaG family.
   
  
 0.622
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.593
Ping_2701
PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: noc:Noc_2438 sigma 54 modulation protein/ribosomal protein S30EA.
  
  
 0.578
Ping_0077
PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM.
   
  
 0.547
Ping_0288
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: yps:YPTB0844 putative sigma 54 modulation protein.
   
    0.538
Ping_1763
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3403 ribosomal subunit interface protein.
   
    0.538
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.