node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ping_1275 | Ping_2063 | Ping_1275 | Ping_2063 | Aspartate kinase; KEGG: vfi:VF2118 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | 0.521 |
Ping_1275 | metG | Ping_1275 | Ping_1623 | Aspartate kinase; KEGG: vfi:VF2118 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.643 |
Ping_1275 | rplS | Ping_1275 | Ping_3364 | Aspartate kinase; KEGG: vfi:VF2118 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.496 |
Ping_1275 | tig | Ping_1275 | Ping_1464 | Aspartate kinase; KEGG: vfi:VF2118 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.515 |
Ping_2063 | Ping_1275 | Ping_2063 | Ping_1275 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | Aspartate kinase; KEGG: vfi:VF2118 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.521 |
Ping_2063 | Ping_3137 | Ping_2063 | Ping_3137 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | ABC transporter ATP-binding protein; PFAM: protein of unknown function DUF462; KEGG: pat:Patl_3387 protein of unknown function DUF462. | 0.474 |
Ping_2063 | aspS | Ping_2063 | Ping_0699 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.805 |
Ping_2063 | metG | Ping_2063 | Ping_1623 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.528 |
Ping_2063 | rplS | Ping_2063 | Ping_3364 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.664 |
Ping_2063 | rpmF | Ping_2063 | Ping_1085 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pat:Patl_2126 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.533 |
Ping_2063 | ruvA | Ping_2063 | Ping_0718 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.663 |
Ping_2063 | ruvC | Ping_2063 | Ping_0716 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.669 |
Ping_2063 | tig | Ping_2063 | Ping_1464 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.549 |
Ping_2063 | tyrS | Ping_2063 | Ping_0921 | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.764 |
Ping_3137 | Ping_2063 | Ping_3137 | Ping_2063 | ABC transporter ATP-binding protein; PFAM: protein of unknown function DUF462; KEGG: pat:Patl_3387 protein of unknown function DUF462. | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | 0.474 |
aspS | Ping_2063 | Ping_0699 | Ping_2063 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Glucose-1-phosphate adenylyl transferase; PFAM: protein of unknown function DUF28; KEGG: vch:VCA0006 hypothetical protein. | 0.805 |
aspS | metG | Ping_0699 | Ping_1623 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.758 |
aspS | rpmF | Ping_0699 | Ping_1085 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pat:Patl_2126 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.480 |
aspS | ruvA | Ping_0699 | Ping_0718 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.661 |
aspS | ruvC | Ping_0699 | Ping_0716 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.604 |