STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2069KEGG: rde:RD1_1973 ABC transporter, ATP-binding protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase. (597 aa)    
Predicted Functional Partners:
Ping_1514
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_402 probable ATP-binding component of ABC transporter; TC 3.A.1.3.-.
 
     
0.899
Ping_0573
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL2259 ABC-type multidrug transport system, ATPase component.
 
 
0.803
Ping_2616
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_2980 ABC transporter, ATP-binding/permease protein.
  
 
0.534
Ping_2844
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4325 ABC transporter, ATP-binding/permease protein.
   
   0.499
Ping_2066
Hypothetical protein; KEGG: noc:Noc_1879 AAA ATPase.
   
 0.498
Ping_1247
KEGG: mxa:MXAN_2773 ATPase, AAA family; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Belongs to the AAA ATPase family.
 
 
 0.466
Ping_2377
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0135 putative ABC transporter, ATP-binding protein.
 
    
0.448
phnC
ABC phosphonate transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.414
lpxK
lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.409
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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