Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_2081PFAM: NADPH-dependent FMN reductase; KEGG: pmu:PM1472 hypothetical M. pneumoniae. (180 aa)    
Predicted Functional Partners:
Ping_2902
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: noc:Noc_2217 glutathione S-transferase-like.
  
    0.546
Ping_2702
KEGG: tcx:Tcr_1937 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3.
  
  
 0.490
Ping_0513
PFAM: luciferase family protein; KEGG: mxa:MXAN_5094 luciferase-like monooxygenase family protein.
  
 
 0.486
Ping_2375
KEGG: vpa:VPA0133 putative ABC transporter substrate-binding protein.
  
  
 0.406
Ping_2720
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: ppr:PBPRB0337 hypothetical 2-hydroxychromene-2-carboxylateisomerase family protein.
  
    0.401
Ping_3620
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: sdn:Sden_0285 DsbA oxidoreductase.
  
    0.401
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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