STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2083TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: jan:Jann_0020 amino acid carrier protein. (553 aa)    
Predicted Functional Partners:
Ping_3490
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.691
Ping_0866
PFAM: Cl- channel, voltage-gated family protein; KEGG: ppr:PBPRA0530 putative chloride channel protein EriC.
   
    0.531
Ping_2084
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.528
Ping_1009
Transporter, NhaC family; PFAM: Na+/H+ antiporter NhaC; KEGG: vfi:VF1630 Na(+)/H(+) antiporter; TC 2.A.35.
 
  
 0.494
Ping_2297
PFAM: sodium:neurotransmitter symporter; KEGG: ilo:IL1275 Na+-dependent transporter of the SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
 0.427
Ping_1338
PFAM: sodium:dicarboxylate symporter; KEGG: ppr:PBPRA1167 putative proton/glutamate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.412
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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