STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2103PFAM: CBS domain containing protein; EAL domain protein; KEGG: ilo:IL2293 signaling protein (EAL,CBS,GGDEF domains). (409 aa)    
Predicted Functional Partners:
Ping_2916
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA0878 hypothetical protein.
 
    0.963
Ping_0978
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: tte:TTE1717 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain.
 
 
   0.923
Ping_2550
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tbd:Tbd_1042 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s).
   0.892
Ping_3317
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pen:PSEEN0412 sensory box proten; GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
   0.765
Ping_1839
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: eba:ebA2147 conserved hypothetical protein, contains PAS domains; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
   0.762
Ping_2088
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: vpa:VP0092 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
   0.756
Ping_1306
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3335 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
 
    0.750
Ping_3077
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: vfi:VFA0056 hypothetical protein.
    0.720
Ping_2150
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Tmden_0218 diguanylate cyclase (GGDEF domain).
 
    0.711
Ping_1821
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: lic:LIC11128 GGDEF family protein.
 
    0.702
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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