STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2107PFAM: glycoside hydrolase, family 3 domain protein; KEGG: vvu:VV21304 beta-glucosidase-related glycosidase; Belongs to the glycosyl hydrolase 3 family. (928 aa)    
Predicted Functional Partners:
Ping_0139
PFAM: glycoside hydrolase, family 3 domain protein; KEGG: bur:Bcep18194_C6710 beta-glucosidase.
 
  
  0.941
Ping_2841
6-phospho-beta-glucosidase; PFAM: glycoside hydrolase, family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.919
Ping_2381
alpha-D-1,4-glucosidase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: eba:ebA583 exo-alpha-1,4-glucosidase.
  
 
 0.918
Ping_0974
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
  0.900
lacZ
Beta-galactosidase; PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: vvy:VVA0165 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.597
infB
Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.549
Ping_2529
PFAM: glycoside hydrolase, family 31; glycoside hydrolase, starch-binding; KEGG: ppr:PBPRB0321 hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.487
Ping_2667
PFAM: aldo/keto reductase; KEGG: sme:SMc01702 putative oxidoreductase protein.
  
     0.467
Ping_2639
P-loop ATPase; KEGG: cac:CAC1583 predicted P-loop ATPase.
 
     0.445
Ping_2668
PFAM: aldo/keto reductase; KEGG: sde:Sde_1479 putative oxidoreducatse.
  
     0.442
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.