STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2126PFAM: BCCT transporter; KEGG: pcr:Pcryo_1813 BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (533 aa)    
Predicted Functional Partners:
Ping_2125
KEGG: pcr:Pcryo_1812 hypothetical protein.
 
     0.697
Ping_2127
PFAM: peptidase M19, renal dipeptidase; KEGG: pcr:Pcryo_1814 peptidase M19, renal dipeptidase.
 
     0.632
Ping_2124
KEGG: pcr:Pcryo_1811 hypothetical protein.
       0.530
Ping_2128
PFAM: aldehyde dehydrogenase; KEGG: pcr:Pcryo_1815 aldehyde dehydrogenase.
  
 0.515
Ping_2130
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pcr:Pcryo_1817 transcriptional regulator, LysR family.
 
     0.448
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.