STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ping_2138PFAM: EAL domain protein; KEGG: pol:Bpro_2469 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain). (247 aa)    
Predicted Functional Partners:
Ping_3077
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: vfi:VFA0056 hypothetical protein.
  
 0.977
Ping_1306
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3335 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
 
    0.976
Ping_2139
PFAM: response regulator receiver; KEGG: pol:Bpro_2469 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain).
 
   0.976
Ping_2550
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tbd:Tbd_1042 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s).
 
 0.976
Ping_2916
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA0878 hypothetical protein.
 
    0.975
Ping_1205
Diguanylate cyclase with PAS/PAC sensor; KEGG: dar:Daro_2825 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 0.971
Ping_1821
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: lic:LIC11128 GGDEF family protein.
 
    0.966
Ping_1121
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pha:PSHAa0644 two-component response regulator with GGDEF domain.
 
    0.963
Ping_1835
TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; KEGG: tbd:Tbd_1411 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
 0.959
Ping_2732
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sfr:Sfri_1536 diguanylate cyclase.
 
    0.948
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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