STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
napDPeriplasmic nitrate reductase chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (86 aa)    
Predicted Functional Partners:
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.994
napB
Periplasmic nitrate reductase subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.978
napF
Periplasmic nitrate reductase maturation protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
 
  
 0.976
napC
Periplasmic nitrate reductase subunit NapC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: vfi:VF1903 cytochrome c-type protein NapC.
 
  
 0.937
Ping_2122
TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pfl:PFL_0293 molybdopterin oxidoreductase, alpha subunit, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.921
Ping_1026
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ppr:PBPRA2525 hypothetical nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.804
Ping_1429
PFAM: FMN-binding domain protein; KEGG: ppr:PBPRB0846 hypothetical NosR, regulator of nitric oxide reductase transcription.
 
  
 0.634
Ping_2705
PFAM: protein of unknown function DUF444; KEGG: sde:Sde_0732 hypothetical protein; Belongs to the UPF0229 family.
   
    0.535
Ping_3163
Hypothetical protein; KEGG: eba:ebA1004 probable di-heme cytochrome c.
  
  
 0.453
Ping_3618
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4737 iron-sulfur cluster-binding protein.
  
  
 0.447
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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