STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2200Integral inner membrane protein UPF0005; PFAM: protein of unknown function UPF0005; KEGG: cps:CPS_2350 putative membrane protein; Belongs to the BI1 family. (219 aa)    
Predicted Functional Partners:
Ping_1966
PFAM: Colicin V production protein; KEGG: ilo:IL1013 uncharacterized membrane protein.
  
    0.562
Ping_1471
Sulfur oxidation protein of DsrC family protein; Part of a sulfur-relay system.
    
 0.545
htpX
Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; HtpX domain protein; KEGG: pha:PSHAa1605 heat shock protein; Belongs to the peptidase M48B family.
  
  
 0.441
htpX-2
Heat shock protein, Metallo peptidase, MEROPS family M48B; PFAM: peptidase M48, Ste24p; HtpX domain protein; KEGG: ilo:IL1320 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.
  
  
 0.441
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.430
Ping_0394
PFAM: DNA polymerase III chi subunit, HolC; KEGG: cps:CPS_0739 DNA polymerase III, chi subunit.
 
     0.423
Ping_1174
PFAM: transport-associated; KEGG: pha:PSHAa2525 hypothetical protein.
  
     0.422
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.