Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_2269PFAM: sulfatase; KEGG: vch:VC2041 hypothetical protein. (595 aa)    
Predicted Functional Partners:
Ping_2268
PFAM: protein of unknown function DUF1414; KEGG: pha:PSHAa1818 hypothetical protein; Belongs to the UPF0352 family.
 
  
 0.913
lapB
Conserved hypothetical protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
  
 
 
 0.912
Ping_2267
PFAM: 37kDa nucleoid-associated protein; KEGG: vvy:VV1167 nucleoid-associated protein.
 
   
 0.853
lapA
Hypothetical protein DUF1049; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
   
 0.685
Ping_0423
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein.
    
 
 0.683
Ping_2884
ABC-type transporter periplasmic protein; PFAM: toluene tolerance family protein; KEGG: son:SO3951 hypothetical protein.
  
   
 0.630
Ping_3310
PFAM: protein of unknown function DUF412; KEGG: yps:YPTB2595 hypothetical protein.
  
     0.625
Ping_3613
PFAM: porin, Gram-negative type; KEGG: vvu:VV20580 outer membrane protein.
  
     0.623
zapB
Hypothetical protein DUF904; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.618
Ping_2955
PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: ppr:PBPRA0837 conserved hypothetical protein; Belongs to the UPF0255 family.
  
     0.594
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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