STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2300KEGG: pcu:pc1824 hypothetical protein. (262 aa)    
Predicted Functional Partners:
Ping_2301
PFAM: peptidase M22, glycoprotease; KEGG: pat:Patl_2808 peptidase M22, glycoprotease.
       0.616
Ping_0307
PFAM: glucose sorbosone dehydrogenase; KEGG: xac:XAC3868 dehydrogenase.
 
      0.436
Ping_2302
SMART: helicase c2; KEGG: ppr:PBPRA1070 putative ATP-dependent helicase, DinG family.
       0.430
Ping_0898
KEGG: son:SO2804 hypothetical protein.
  
     0.419
Ping_2816
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pat:Patl_1658 TPR repeat.
  
     0.407
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.