STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2318KEGG: tcx:Tcr_1766 hypothetical protein. (87 aa)    
Predicted Functional Partners:
Ping_2321
HPr kinase; KEGG: tcx:Tcr_1769 HPr kinase.
 
     0.879
Ping_2323
KEGG: tcx:Tcr_1767 hypothetical protein.
 
     0.853
Ping_2322
PFAM: RimK domain protein ATP-grasp; KEGG: tcx:Tcr_1768 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like.
 
     0.842
Ping_2319
KEGG: tcx:Tcr_1765 hypothetical protein.
       0.626
Ping_2320
PFAM: Phosphoglycerate mutase; KEGG: tcx:Tcr_1764 phosphoglycerate/bisphosphoglycerate mutase.
       0.519
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.