Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_2351PFAM: protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: ppr:PBPRA2167 hypothetical protein. (414 aa)    
Predicted Functional Partners:
Ping_1694
KEGG: cps:CPS_0257 hypothetical protein.
  
     0.565
Ping_0849
PFAM: monooxygenase, FAD-binding; KEGG: cps:CPS_3257 monooxygenase family protein.
  
     0.564
Ping_0856
PFAM: protein of unknown function UPF0153; KEGG: pha:PSHAb0120 hypothetical protein.
  
     0.521
Ping_1020
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein.
  
     0.519
Ping_2352
KEGG: vch:VCA0343 hypothetical protein.
       0.505
Ping_1812
Nucleotide phosphate derivative pyrophosphohydrolase, MutT/nudix family protein; PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0617 putative MutT/NUDIX family protein.
  
     0.458
Ping_1886
KEGG: pha:PSHAa1013 hypothetical protein.
  
     0.449
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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