STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2370PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: sdn:Sden_2348 ATPase associated with various cellular activities, AAA_3. (305 aa)    
Predicted Functional Partners:
Ping_2368
PFAM: transglutaminase domain protein; KEGG: psb:Psyr_2055 transglutaminase-like.
 
   
 0.950
Ping_2369
PFAM: protein of unknown function DUF58; KEGG: sdn:Sden_2349 protein of unknown function DUF58.
  
 0.929
Ping_2813
PFAM: protein of unknown function DUF58; KEGG: pat:Patl_1661 protein of unknown function DUF58.
 
  
 0.732
Ping_2815
PFAM: von Willebrand factor, type A; KEGG: ppr:PBPRB1845 conserved hypothetical protein.
 
  
 0.480
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.