Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_2395PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: cvi:CV1468 probable activation/secretion signal peptide protein. (569 aa)    
Predicted Functional Partners:
Ping_2394
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: dps:DP1520 hypothetical protein.
 
 
 0.973
Ping_2235
Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
   
    0.555
Ping_3182
Similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS.
 
   
 0.526
Ping_1350
PFAM: peptidase M56, BlaR1; KEGG: noc:Noc_0291 hypothetical protein.
  
     0.459
Ping_3184
PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0747 efflux outer membrane protein.
  
  
 0.426
Ping_3160
PFAM: extracellular solute-binding protein, family 5; KEGG: sil:SPO0706 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
  
     0.421
Ping_3181
KEGG: pen:PSEEN0739 hypothetical protein.
 
     0.412
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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