STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2425Gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03; PFAM: gamma-glutamyltranspeptidase; KEGG: vch:VCA0558 gamma-glutamyltranspeptidase, putative. (523 aa)    
Predicted Functional Partners:
Ping_2424
Serine--pyruvate transaminase; PFAM: aminotransferase, class V; KEGG: pat:Patl_2052 aminotransferase, class V.
 
     0.905
Ping_2426
PFAM: Amidase; KEGG: pat:Patl_2055 amidase; Belongs to the amidase family.
 
    0.884
Ping_2423
KEGG: pat:Patl_2051 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein.
 
   
 0.860
Ping_2427
PFAM: Bile acid:sodium symporter; KEGG: transporter, putative.
  
    0.782
Ping_2428
PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pat:Patl_2057 transcriptional regulator, RpiR family.
 
     0.643
Ping_2429
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB0869 putative amino acid ABC transporter, ATP-binding protein; TC 3.A.1.3.-.
  
    0.536
Ping_2939
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; PFAM: Amidase; KEGG: pat:Patl_2055 amidase.
 
    0.536
Ping_2432
PFAM: extracellular solute-binding protein, family 3; KEGG: ypn:YPN_0839 amino acid ABC transporter, periplasmic protein; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family.
 
    0.515
Ping_2430
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3493 putative amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
    0.508
Ping_2431
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB0867 putative amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
  
    0.501
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.