STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2434TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; KEGG: jan:Jann_1394 HAD-superfamily subfamily IIA hydrolase, hypothetical 3. (274 aa)    
Predicted Functional Partners:
Ping_0438
Transporter of NadC family protein; KEGG: mba:Mbar_B3744 hypothetical protein.
 
     0.562
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
    
   0.531
Ping_0437
Hypothetical protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein.
  
     0.525
Ping_0423
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sde:Sde_0178 hypothetical protein.
  
     0.509
Ping_0432
Protein involved in cellulose biosynthesis (CelD)-like protein; KEGG: mxa:MXAN_3233 hypothetical protein.
  
     0.509
Ping_0433
PFAM: Heparinase II/III family protein; KEGG: aba:Acid345_3793 heparinase II/III-like.
  
     0.457
dusA
tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.
  
     0.448
Ping_1294
Hypothetical protein; KEGG: pha:PSHAb0262 putative orphan protein.
  
     0.447
Ping_0508
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 
     0.442
Ping_0456
PFAM: glycosyl transferase, group 1; KEGG: son:SO4681 glycosyl transferase, group 1 family protein.
  
     0.441
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.