STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2480KEGG: rfr:Rfer_1360 hypothetical protein. (303 aa)    
Predicted Functional Partners:
Ping_2479
Plasmid and phage replicative helicase; KEGG: ypk:y3088 hypothetical protein.
      0.891
Ping_0234
PFAM: phage integrase family protein; KEGG: son:SO1471 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.619
Ping_2463
PFAM: phage integrase family protein; KEGG: cps:CPS_2917 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.616
Ping_1601
PFAM: phage integrase family protein; KEGG: vvy:VV0817 phage integrase; Belongs to the 'phage' integrase family.
 
     0.615
Ping_2496
PFAM: phage integrase family protein; KEGG: vvy:VV0817 phage integrase; Belongs to the 'phage' integrase family.
 
     0.606
Ping_2464
KEGG: vvy:VV0817 phage integrase; Belongs to the 'phage' integrase family.
 
     0.601
Ping_0405
PFAM: phage integrase family protein; KEGG: son:SO2978 prophage LambdaSo, site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
 
     0.556
Ping_1598
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0810 predicted transcriptional regulator.
 
     0.488
Ping_2482
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: sde:Sde_2745 putative transcriptional regulator.
       0.465
Ping_2481
KEGG: sgl:SG0738 hypothetical protein.
       0.447
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.