STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2481KEGG: sgl:SG0738 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Ping_2482
Phage transcriptional regulator, AlpA; PFAM: Prophage CP4-57 regulatory; KEGG: sde:Sde_2745 putative transcriptional regulator.
       0.776
Ping_0959
PFAM: UspA domain protein; KEGG: vch:VC0076 universal stress protein A.
  
     0.540
Ping_2479
Plasmid and phage replicative helicase; KEGG: ypk:y3088 hypothetical protein.
       0.454
Ping_2480
KEGG: rfr:Rfer_1360 hypothetical protein.
       0.450
Ping_0955
PFAM: UspA domain protein; KEGG: vch:VC0076 universal stress protein A.
  
     0.448
Ping_1234
PFAM: UspA domain protein; KEGG: vvy:VV0075 universal stress protein UspA.
  
     0.411
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.