STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2527KEGG: sdn:Sden_2317 hypothetical protein. (256 aa)    
Predicted Functional Partners:
Ping_0905
KEGG: cps:CPS_4187 putative ATP synthase F0, A subunit.
  
     0.566
bamC
NlpBDapX family lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.556
Ping_0994
SMART: peptidase S16, lon domain protein; KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein.
 
     0.497
Ping_0575
PFAM: putative methyltransferase; KEGG: pha:PSHAa2295 methyltransferase SAM dependent.
  
     0.494
Ping_2814
KEGG: lpp:lpp2915 hypothetical protein.
  
     0.469
Ping_0208
KEGG: pha:PSHAa2750 hypothetical protein.
  
     0.456
ftsN
Cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: pat:Patl_4190 sporulation related.
  
     0.454
Ping_3433
KEGG: pha:PSHAa0505 hypothetical protein.
  
     0.454
Ping_1857
PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: vch:VC1212 DNA polymerase II.
  
     0.404
Ping_3091
PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568.
  
     0.402
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.