STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2601KEGG: cps:CPS_0507 hypothetical protein. (408 aa)    
Predicted Functional Partners:
Ping_2600
Sucrose phosphorylase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: cps:CPS_0506 putative sucrose phosphorylase.
   
 0.991
Ping_2602
Mannosyl-3-phosphoglycerate phosphatase family protein; KEGG: cps:CPS_0508 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase family; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3.
 
     0.940
Ping_1123
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.815
Ping_0839
KEGG: neu:NE1157 hypothetical protein.
   
 
 0.814
Ping_1167
KEGG: sbo:SBO_2540 hypothetical protein.
   
 
 0.814
Ping_1840
PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: dar:Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type.
  
 
 0.513
Ping_3128
PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; KEGG: dar:Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type.
  
 
 0.513
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
   0.510
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
    0.475
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.448
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.