STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2616PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_2980 ABC transporter, ATP-binding/permease protein. (591 aa)    
Predicted Functional Partners:
Ping_0616
KEGG: vpa:VP1726 ABC superfamily (glycine/betaine/proline transport protein); TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 
     
0.880
Ping_2011
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: eca:ECA0851 putative sugar ABC transporter ATP-binding protein; TC 3.A.1.1.-.
 
     
0.778
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.675
Ping_2377
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0135 putative ABC transporter, ATP-binding protein.
 
     
0.559
Ping_2069
KEGG: rde:RD1_1973 ABC transporter, ATP-binding protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
  
 
0.534
Ping_0573
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL2259 ABC-type multidrug transport system, ATPase component.
 
  
0.519
Ping_2662
ABC transporter ATPase and inner membrane protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll5254 ABC transporter, ATP-binding protein.
  
 
0.496
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
0.492
Ping_2332
ABC transporter ATP-binding and permease protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3416 ABC transporter-related protein.
  
 
0.492
Ping_0691
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative.
  
 
0.482
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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