STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2646PFAM: Endoribonuclease L-PSP; KEGG: vfi:VFA0002 translation initiation inhibitor. (116 aa)    
Predicted Functional Partners:
Ping_2082
D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase; KEGG: atc:AGR_L_3050 D-amino-acid dehydrogenase.
 
  
 0.488
Ping_2647
PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_3391 membrane protein.
       0.445
Ping_2645
PFAM: phospholipid/glycerol acyltransferase; KEGG: pat:Patl_1245 phospholipid/glycerol acyltransferase.
       0.409
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.