STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ping_2668PFAM: aldo/keto reductase; KEGG: sde:Sde_1479 putative oxidoreducatse. (326 aa)    
Predicted Functional Partners:
Ping_2666
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; KEGG: sru:SRU_0347 oxidoreductase family, NAD-binding Rossmann fold domain protein.
 
  
 0.633
Ping_2667
PFAM: aldo/keto reductase; KEGG: sme:SMc01702 putative oxidoreductase protein.
 
    
0.622
Ping_2697
PFAM: histone deacetylase superfamily; KEGG: cps:CPS_1655 histone deacetylase family protein.
   
  0.541
Ping_2669
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vfi:VFA0053 transcriptional regulators, LysR family.
       0.506
Ping_1243
PFAM: protein of unknown function DUF336; KEGG: ppr:PBPRB1633 hypothetical protein; Belongs to the UPF0303 family.
  
    0.492
Ping_2529
PFAM: glycoside hydrolase, family 31; glycoside hydrolase, starch-binding; KEGG: ppr:PBPRB0321 hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.457
Ping_2107
PFAM: glycoside hydrolase, family 3 domain protein; KEGG: vvu:VV21304 beta-glucosidase-related glycosidase; Belongs to the glycosyl hydrolase 3 family.
  
     0.442
Ping_3166
KEGG: vfi:VFA0235 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.431
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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