STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2690Peptidase; KEGG: pfa:PFD0320c-1 hypothetical protein. (607 aa)    
Predicted Functional Partners:
Ping_2691
KEGG: bth:BT4603 hypothetical protein.
       0.768
Ping_2692
PFAM: Heat shock protein 70; KEGG: bth:BT4602 chaperone protein DnaK.
       0.768
Ping_1749
ATP synthase B subunit (AtpF); KEGG: hsa:26064 retinoic acid induced 14.
  
     0.693
Ping_2687
Ribosome recycling factor.
       0.499
Ping_2688
KEGG: sth:STH1792 hypothetical protein.
       0.499
Ping_2689
Hypothetical protein.
       0.499
Ping_3145
ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: psp:PSPPH_4558 MutT domain protein-like.
  
     0.447
Ping_1673
PFAM: peptidase C1A, papain; KEGG: dre:368704 cathepsin C.
  
     0.434
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.