STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2694PFAM: Endonuclease/exonuclease/phosphatase; KEGG: vch:VC2621 extracellular nuclease-related protein. (1010 aa)    
Predicted Functional Partners:
Ping_2695
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sdn:Sden_2137 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 0.592
Ping_2205
KEGG: vch:VC1887 hypothetical protein.
 
     0.502
Ping_0888
PFAM: Rhomboid family protein; KEGG: cps:CPS_2148 membrane protein, Rhomboid family.
  
   
 0.498
Ping_0106
General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.486
Ping_2580
PFAM: Endonuclease I; KEGG: ppr:PBPRC0029 putative endonuclease I.
     
 0.481
Ping_3246
KEGG: ppr:PBPRB0433 hypothetical protein.
  
     0.467
Ping_3433
KEGG: pha:PSHAa0505 hypothetical protein.
  
     0.450
Ping_3091
PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568.
  
     0.445
Ping_0052
PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568.
  
     0.442
Ping_2307
PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568.
  
     0.437
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.