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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2708KEGG: vch:VC1610 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Ping_1749
ATP synthase B subunit (AtpF); KEGG: hsa:26064 retinoic acid induced 14.
  
     0.737
Ping_2579
PFAM: Radical SAM domain protein; KEGG: vvu:VV20908 molybdenum cofactor biosynthesis enzyme.
  
     0.706
Ping_2707
Metallophosphoesterase; KEGG: rba:RB13110 probable diadenosine tetraphosphatase.
       0.528
Ping_3145
ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: psp:PSPPH_4558 MutT domain protein-like.
  
    0.491
Ping_1620
TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hch:HCH_04101 predicted sugar phosphatase of the HAD superfamily.
  
     0.482
Ping_3528
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vvy:VVA0445 CbbY family protein.
 
    0.460
Ping_2723
PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: cps:CPS_4627 serine protease, trypsin family.
  
     0.452
Ping_2709
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ppr:PBPRB1001 hypothetical protein.
       0.400
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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