STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2718KEGG: cps:CPS_1415 hypothetical protein. (123 aa)    
Predicted Functional Partners:
Ping_0859
KEGG: sde:Sde_0395 hypothetical protein.
  
     0.771
Ping_1020
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cps:CPS_1308 endonuclease/exonuclease/phosphatase family protein.
  
     0.718
Ping_0764
PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein.
  
     0.663
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: ppr:PBPRA1469 putative phosphoribosylaminoimidazole-succinocar boxamide synthase.
  
     0.598
Ping_0107
PFAM: type II secretion system protein N; KEGG: ppr:PBPRA3471 hypothetical general secretion pathway protein N.
  
     0.553
Ping_1675
KEGG: cps:CPS_1176 hypothetical protein.
  
     0.552
Ping_1846
PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein.
  
     0.537
Ping_0347
Acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: vfi:VF2557 acetolactate synthase small subunit.
  
     0.512
Ping_2555
KEGG: vvy:VV0144 hypothetical protein.
  
     0.484
Ping_0145
PFAM: type III restriction enzyme, res subunit; KEGG: sfr:Sfri_3418 type III restriction enzyme, res subunit.
  
     0.479
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.