node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ping_1270 | Ping_2453 | Ping_1270 | Ping_2453 | KEGG: noc:Noc_1005 hypothetical protein. | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.877 |
Ping_1270 | Ping_2520 | Ping_1270 | Ping_2520 | KEGG: noc:Noc_1005 hypothetical protein. | Hypothetical protein. | 0.743 |
Ping_1270 | Ping_2724 | Ping_1270 | Ping_2724 | KEGG: noc:Noc_1005 hypothetical protein. | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.621 |
Ping_1270 | Ping_3013 | Ping_1270 | Ping_3013 | KEGG: noc:Noc_1005 hypothetical protein. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.870 |
Ping_1270 | Ping_3112 | Ping_1270 | Ping_3112 | KEGG: noc:Noc_1005 hypothetical protein. | ATP-dependent RNA helicase, DEAD box family protein; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bca:BCE0855 DEAD/DEAH box helicase domain protein. | 0.842 |
Ping_1270 | rplC | Ping_1270 | Ping_3524 | KEGG: noc:Noc_1005 hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.997 |
Ping_1270 | rpsE | Ping_1270 | Ping_3507 | KEGG: noc:Noc_1005 hypothetical protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.994 |
Ping_2453 | Ping_1270 | Ping_2453 | Ping_1270 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | KEGG: noc:Noc_1005 hypothetical protein. | 0.877 |
Ping_2453 | Ping_2724 | Ping_2453 | Ping_2724 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.603 |
Ping_2453 | Ping_3013 | Ping_2453 | Ping_3013 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.431 |
Ping_2453 | pnp | Ping_2453 | Ping_0825 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.470 |
Ping_2453 | rplC | Ping_2453 | Ping_3524 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.936 |
Ping_2520 | Ping_1270 | Ping_2520 | Ping_1270 | Hypothetical protein. | KEGG: noc:Noc_1005 hypothetical protein. | 0.743 |
Ping_2520 | Ping_2724 | Ping_2520 | Ping_2724 | Hypothetical protein. | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.568 |
Ping_2520 | rpsE | Ping_2520 | Ping_3507 | Hypothetical protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.946 |
Ping_2723 | Ping_2724 | Ping_2723 | Ping_2724 | PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: cps:CPS_4627 serine protease, trypsin family. | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.580 |
Ping_2724 | Ping_1270 | Ping_2724 | Ping_1270 | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | KEGG: noc:Noc_1005 hypothetical protein. | 0.621 |
Ping_2724 | Ping_2453 | Ping_2724 | Ping_2453 | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.603 |
Ping_2724 | Ping_2520 | Ping_2724 | Ping_2520 | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.568 |
Ping_2724 | Ping_2723 | Ping_2724 | Ping_2723 | PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB0212 putative ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: cps:CPS_4627 serine protease, trypsin family. | 0.580 |