STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2745PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0238 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (367 aa)    
Predicted Functional Partners:
Ping_2744
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvu:VV21670 ABC-type Fe3+ transport system, permease component.
 
 0.994
Ping_2746
ABC transporter periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: vvu:VV21665 ABC-type Fe3+ transport system, periplasmic component.
 
 
 0.978
Ping_3006
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2150 iron(III)-transport system permease protein SfuB.
 
 0.944
Ping_3005
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.914
Ping_1426
ABC transporter for copper ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB0849 hypothetical NosF protein.
 
    
0.910
Ping_3007
KEGG: vfi:VF2151 iron(III)-binding protein.
 
 
 0.893
Ping_1238
KEGG: sme:SMc00991 putative putrescine-binding periplasmic protein.
 
 
 0.824
Ping_2662
ABC transporter ATPase and inner membrane protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll5254 ABC transporter, ATP-binding protein.
 
    
0.806
Ping_2165
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.788
Ping_2743
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: vvy:VVA0480 transcriptional regulator.
   
   0.773
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.