STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phnXPhosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (295 aa)    
Predicted Functional Partners:
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
 0.999
Ping_2748
PFAM: aminotransferase class-III; KEGG: vvu:VV21663 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
  0.986
Ping_2746
ABC transporter periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: vvu:VV21665 ABC-type Fe3+ transport system, periplasmic component.
 
   
 0.895
Ping_2744
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvu:VV21670 ABC-type Fe3+ transport system, permease component.
 
     0.870
Ping_2743
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: vvy:VVA0480 transcriptional regulator.
 
  
 0.697
Ping_3315
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: vch:VC2033 alcohol dehydrogenase/acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.563
Ping_2745
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0238 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.523
Ping_2742
KEGG: vpa:VPA0241 hypothetical protein.
 
     0.508
Ping_2424
Serine--pyruvate transaminase; PFAM: aminotransferase, class V; KEGG: pat:Patl_2052 aminotransferase, class V.
 
   
 0.451
Ping_0840
PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB2866 putative MFS family 3-phenylpropionic acid transporter.
 
    0.419
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.