STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2768KEGG: vvy:VV1412 ABC-type uncharacterized transport system, periplasmic component. (381 aa)    
Predicted Functional Partners:
Ping_2769
KEGG: vpa:VP1195 putative ABC transporter, permease protein.
 
  
 0.962
Ping_2770
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA2116 putative ABC-type uncharacterized transport system ATPase component.
 
   
 0.956
Ping_2771
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ppr:PBPRA2117 putative phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.929
Ping_2767
Mercuric reductase, membrane-associated; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ppr:PBPRA2113 hypothetical protein.
 
  
 0.900
Ping_1319
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pat:Patl_2648 exodeoxyribonuclease III.
      0.723
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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