STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2799Acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VF1344 acetyltransferase. (154 aa)    
Predicted Functional Partners:
Ping_3706
PFAM: Thioredoxin domain; KEGG: ilo:IL2069 thioredoxin related protein.
      0.567
argG
PFAM: argininosuccinate synthase; KEGG: shm:Shewmr7_0239 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.441
Ping_2797
Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
       0.432
Ping_2798
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
       0.432
Ping_2800
PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1618 multidrug resistance protein, putative.
       0.429
Ping_1007
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit.
     
 0.419
Ping_1731
Galactoside O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; KEGG: vvy:VVA0614 acetyltransferase.
 
   
 0.410
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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