STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ping_2804Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_4130 putative periplasmic ribose-binding protein of ABC transport system; TC 3.A.1.2.-. (313 aa)    
Predicted Functional Partners:
Ping_0342
PFAM: inner-membrane translocator; KEGG: ppr:PBPRB1558 putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.997
Ping_2789
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bsu:BG10880 D-ribose transport system permease protein; TC 3.A.1.2.-.
 0.996
Ping_2807
PFAM: inner-membrane translocator; KEGG: mlo:mll3597 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.996
Ping_2788
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: gka:GK3227 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 0.994
Ping_2808
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcn:Bcen_1063 ABC transporter related; TC 3.A.1.2.-.
 
 0.982
rbsA
Ribose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.970
Ping_2787
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK3228 ribose ABC transporter (ATP-binding protein); TC 3.A.1.2.-.
 
 0.966
Ping_0528
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: vch:VC2453 sensor histidine kinase/response regulator.
   
 
 0.851
Ping_0484
Multi-sensor histidine kinase with CHASE and PAS/PAC sensory domains; KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.849
Ping_2805
Sensor histidine kinase/response regulator fused protein, ATPase domain protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: pmu:PM1380 hybrid histidine protein kinase-phosphate acceptor regulatory protein.
 
 
   0.846
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.