STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKSSU ribosomal protein S6P modification protein; TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; KEGG: sde:Sde_2032 ammonium transporter. (302 aa)    
Predicted Functional Partners:
Ping_2826
Aspartyl protease; PFAM: protein of unknown function DUF785; KEGG: sde:Sde_2034 transglutaminase-like.
     0.989
Ping_2827
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sde:Sde_2033 hypothetical protein.
     0.949
Ping_2322
PFAM: RimK domain protein ATP-grasp; KEGG: tcx:Tcr_1768 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like.
  
     0.633
Ping_2830
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: tcx:Tcr_0935 Mg2+ transporter protein, CorA-like.
 
     0.554
Ping_2829
PFAM: MscS Mechanosensitive ion channel; KEGG: cps:CPS_1934 mechanosensitive ion channel family protein.
 
    0.521
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.