STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2830PFAM: Mg2+ transporter protein, CorA family protein; KEGG: tcx:Tcr_0935 Mg2+ transporter protein, CorA-like. (320 aa)    
Predicted Functional Partners:
Ping_2829
PFAM: MscS Mechanosensitive ion channel; KEGG: cps:CPS_1934 mechanosensitive ion channel family protein.
 
   
 0.774
rimK
SSU ribosomal protein S6P modification protein; TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; KEGG: sde:Sde_2032 ammonium transporter.
 
     0.614
Ping_2826
Aspartyl protease; PFAM: protein of unknown function DUF785; KEGG: sde:Sde_2034 transglutaminase-like.
 
     0.605
Ping_2827
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sde:Sde_2033 hypothetical protein.
 
     0.570
Ping_3300
Iron and zinc efflux system protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: spt:SPA3904 ferrous iron efflux protein F; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
  
 0.435
Ping_2831
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF1585 histidine transport system permease protein HisM; TC 3.A.1.3.-.
       0.423
Ping_2832
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2740 putative ABC-type arginine transport system, permease component; TC 3.A.1.3.-.
       0.423
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.