STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2847KEGG: cps:CPS_4328 cadherin domain protein. (1699 aa)    
Predicted Functional Partners:
Ping_2848
KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
  
  
 
0.906
Ping_3182
Similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS.
     
  0.900
Ping_2845
PFAM: outer membrane efflux protein; KEGG: cps:CPS_4326 outer membrane efflux protein.
 
  
 0.810
Ping_2846
PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cps:CPS_4327 TPR domain protein.
 
    0.688
Ping_1846
PFAM: SMC domain protein; KEGG: cps:CPS_2616 hypothetical protein.
  
     0.634
Ping_2844
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4325 ABC transporter, ATP-binding/permease protein.
 
  
 0.599
Ping_1848
KEGG: cps:CPS_2618 hypothetical protein.
  
     0.597
ftsK
DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; KEGG: cps:CPS_2759 cell division protein FtsK.
    
 
 0.521
Ping_1694
KEGG: cps:CPS_0257 hypothetical protein.
  
     0.516
Ping_1683
KEGG: cps:CPS_3105 hypothetical protein.
  
     0.504
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.