STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2908Trehalose-6-phosphate hydrolase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: btk:BT9727_3756 oligo-1,6-glucosidase. (562 aa)    
Predicted Functional Partners:
Ping_0974
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.924
Ping_2365
KEGG: pat:Patl_1635 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
  
 
 0.919
Ping_2014
PFAM: glycoside hydrolase, clan GH-D; KEGG: vvy:VVA0166 alpha-galactosidase.
  
 
 0.911
Ping_2381
alpha-D-1,4-glucosidase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: eba:ebA583 exo-alpha-1,4-glucosidase.
  
  
 
0.906
Ping_2383
Dextran glucosidase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: ppr:PBPRB0410 putative glycosidase.
  
  
 
0.905
Ping_2909
Transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: hch:HCH_04796 transcriptional regulator.
  
    0.606
Ping_0278
Ethanolamine:proton symporter, EAT family; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: hch:HCH_06322 amino acid transporters; TC 2.A.3.5.1.
   
 0.594
Ping_1733
Transporter, cation-chloride cotransporter (CCC) family; PFAM: amino acid permease-associated region; KEGG: sru:SRU_2259 Na-K-Cl cotransporter, putative; TC 2.A.30.
   
 0.594
Ping_0522
Trehalose PTS system EIIBC or EIIBCA component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: ppr:PBPRA1224 putative PTS system, trehalose-specific IIBCcomponent; TC 4.A.1.2.4; TC 4.A.1.2.4.
 
  
 0.546
Ping_0972
Sucrose PTS system EIIBCA or EIIBC component; TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: vch:VCA0653 PTS system, sucrose-specific IIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12.
 
  
 0.508
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.