STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2909Transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: hch:HCH_04796 transcriptional regulator. (365 aa)    
Predicted Functional Partners:
Ping_1007
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit.
    
 
 0.817
scrR
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vch:VCA0654 sucrose operon repressor ScrR, putative.
  
     0.774
Ping_2785
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rme:Rmet_1905 transcriptional regulator, LacI family.
  
     0.774
Ping_2013
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1491 lactose operon repressor.
  
     0.773
Ping_2507
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vpa:VP2396 LacI-family regulatory protein.
  
     0.773
Ping_3233
Transcriptional regulator, LacI family; TIGRFAM: trehalose operon repressor; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ppr:PBPRA1223 putative trehalose operon repressor.
  
     0.770
Ping_3550
Transcriptional regulator, LacI family; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ppr:PBPRA1572 putative fructose transport system repressor.
  
     0.769
Ping_2908
Trehalose-6-phosphate hydrolase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: btk:BT9727_3756 oligo-1,6-glucosidase.
  
    0.606
Ping_0554
PFAM: glycoside hydrolase, family 16; KEGG: vvy:VVA0140 beta-glucanase.
 
     0.560
Ping_2910
Trehalose-binding protein / maltose-binding protein / sucrose-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: sit:TM1040_3307 extracellular solute-binding protein, family 1.
       0.491
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.