STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_2948PFAM: phage integrase family protein; KEGG: mag:amb2127 integrase; Belongs to the 'phage' integrase family. (380 aa)    
Predicted Functional Partners:
Ping_2947
Hypothetical protein.
       0.773
Ping_2946
PFAM: phage integrase family protein; KEGG: mag:amb3688 integrase.
  
   
 0.772
Ping_2152
PFAM: GTP-binding protein, HSR1-related; KEGG: ppr:PBPRA1571 hypothetical protein.
  
     0.688
Ping_2499
PFAM: heat shock protein DnaJ domain protein; KEGG: hch:HCH_06092 DnaJ-class molecular chaperone.
  
    0.586
Ping_2153
Kinase; KEGG: ppr:PBPRA1570 hypothetical protein.
  
     0.551
Ping_3201
KEGG: vvu:VV10863 predicted amidophosphoribosyltransferase.
   
    0.524
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.518
Ping_2498
KEGG: hch:HCH_06093 hypothetical protein.
  
     0.512
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.479
Ping_1529
PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase.
  
    0.405
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.