STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_2959Arylesterase; PFAM: lipolytic enzyme, G-D-S-L family; KEGG: vfi:VFA1044 acyl-CoA thioesterase I. (202 aa)    
Predicted Functional Partners:
Ping_2957
PFAM: protein of unknown function DUF214; KEGG: vfi:VFA1042 ABC transporter component, lysophospholipase L1 transport.
 
 
   0.978
Ping_2958
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VFA1043 ABC transporter ATP-binding protein.
 
 
   0.965
Ping_2394
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein; KEGG: dps:DP1520 hypothetical protein.
 
 
 0.783
Ping_0555
PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: cps:CPS_3716 glycosyl hydrolase, family 16.
  
 
 0.751
Ping_3154
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_0888 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.671
Ping_1859
PFAM: Thioredoxin domain; KEGG: eca:ECA1220 putative thioredoxin.
 
    0.628
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.542
Ping_1278
KEGG: yps:YPTB0975 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase.
      
 0.539
Ping_3312
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.467
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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